Monthly Archives: January 2008

Good Morning from Minnesota…

While Duluth is having a balmy morning, just over 10F, here in the twin cities we are hovering a few below zero. Despite the cold, the ice is simply not as thick as people expect it to be. Bradley Erikson’s truck went through the ice on Leech Lake last night. Bradley got out of the water but died on his way back to his camp. Today is the 100th day of work on the new bridge, replacing God’s Bridge, on Highway 35W, which fell down last summer. (Maybe 35E is the holy branch of the now nationally famous Highway 35, and 35W is the evil twin … ever think about that?)Garrison Keillor is annoyed that his next door neighbor is building a “MacHouse” … that’s what Twin Cities home owners, who traditionally live in tiny little stucco-covered hovels, call the new homes being build as infill all across the metro area with unique designs such as having a second story that you don’t have to bend over to walk around in. Garrison is suing.

Keillor and his wife, Jenny Lind Nilsson, are suing their next-door neighbor, Lori Anderson, to stop her from building a two-story addition to her home that would include a three-stall garage and studio.[Star Tribune, 15 January 2008]

University of Minnesota researchers have figured out how to make a functioning heart from scratch, more or less.Other than that, not much else going on here in the North Star State.

More Bill Foster

If you follow the creationist news stories from around the country, you get a lot of the same exact thing over and over again, and it is hard to identify the novel or persistent elements in the flow of information. But increasingly it is clear that Bill Foster of St. Petersburg Florida is somewhat novel and starting to look persistent. Continue reading More Bill Foster

The Origin of Syphilis

Blogging on Peer-Reviewed ResearchSyphilis is first clearly seen in Europe in 1495, when it appeared as a plague (though it was not “the plague” … Yersinia pestis) among Charles VIII’s troops. When these troops went home shortly after the fall of Naples, they brought this disease with them, staring an epidemic. The level of mortality in Europe was truly devastating. Is it the case that syphilis was brought to Europe by Columbus and his men just prior to the plague-like outbreak of 1495?

The origin of syphilis has been debated for years, really since the actual 1495 event itself. Some researchers have asserted that syphilis is present in the writings of Hippocrates, placing it squarely in the old world thousands of years prior to Columbus. Others, as suggested above, have argued that Columbus brought syphilis over to the Old World . A third (Crosby’s “combination theory”) asserts, essentially, that syphilis is both an Old World and New World disease, and that the history of the disease is complicated by the innately complex relationship between any pathogen and human populations with variable immunities, both of which tend to evolve.

A new paper is being published as we speak in PLoS Neglected Tropical Diseases, by Harper et al , called “On the Origin of the Treponematoses: A Phylogenetic Approach.” Studiously ignoring Crosby’s discussion (and I’m sure there is some unseemly story of academic infighting to explain that), the paper examines the Old World vs. New World origins hypotheses.Here is the author’s summary from the paper:

 

For 500 years, controversy has raged around the origin of T. pallidum subsp. pallidum, the bacterium responsible for syphilis. Did Christopher Columbus and his men introduce this pathogen into Renaissance Europe, after contracting it during their voyage to the New World? Or does syphilis have a much older history in the Old World? This paper represents the first attempt to use a phylogenetic approach to solve this question. In addition, it clarifies the evolutionary relationships between the pathogen that causes syphilis and the other T. pallidum subspecies, which cause the neglected tropical diseases yaws and endemic syphilis. Using a collection of pathogenic Treponema strains that is unprecedented in size, we show that yaws appears to be an ancient infection in humans while venereal syphilis arose relatively recently in human history. In addition, the closest relatives of syphilis-causing strains identified in this study were found in South America, providing support for the Columbian theory of syphilis’s origin.

 

The authors looked at 21 strains of the bacterium Treponematoses pallidum and conducted a detailed genetic (phylogenetic) study of these genomes to come to the conclusion that syphilis originates in the new world. However, a commentary on the paper, published along side it in PLoS, brings the conclusion into question. The commentary by Lukehart and Norris notes that the genetic data from the New World (which the main paper’s authors assert points to a New World origin) is weak. In addition, there are problems, partly outlined in the commentary and partly fairly obvious to anyone who reads the paper, that the issue of evolutionary change in both the pathogens and the humans who harbor them has not been sufficiently taken into account.In my view, a detailed phylogenetic study such as the one presented here is fundamentally important, but is very unlikely on its own to definitively answer the question of origin and evolution of syphilis.Need more research…

Updated: See The Science Behind Pre-Columbian Evidence of Syphilis in Europe: Research by Documentary, by Armelagos, Zuckerman, and Harper, on “Science by documentary” and “Science by press release”

This article discusses the presentation of scientific findings by documentary, without the process of peer review. We use, as an example, PBS’s “The Syphilis Enigma,” in which researchers presented novel evidence concerning the origin of syphilis that had never been reviewed by other scientists. These “findings” then entered the world of peer-reviewed literature through citations of the documentary itself or material associated with it. Here, we demonstrate that the case for pre-Columbian syphilis in Europe that was made in the documentary does not withstand scientific scrutiny. We also situate this example from paleopathology within a larger trend of “science by documentary” or “science by press conference,” in which researchers seek to bypass the peer review process by presenting unvetted findings directly to the public. © 2012 Wiley Periodicals, Inc.

See: Syphilis May Have Spread Through Europe Before Columbus.

Summary: A recent study conducted at the University of Zurich now indicates that Europeans could already have been infected with this sexually transmitted disease before the 15th century. In addition, researchers have discovered a hitherto unknown pathogen causing a related disease. The predecessor of syphilis and its related diseases could be over 2,500 years old.

Lukehart S, Mulligan C, Norris S (2008) Molecular Studies in Treponema pallidum Evolution: Toward Clarity? PLoS Negl Trop Dis 2(1).Harper KN, Ocampo PS, Steiner BM, George RW, Silverman MS, et al. (2008) On the Origin of the Treponematoses: A Phylogenetic Approach. PLoS Negl Trop Dis 2(1): e148. doi:10.1371/journal.pntd.0000148

Jehane Noujaim: TED Prize wish: Unite the world on Pangea Day, a global day of film

In this hopeful talk, 2006 TED Prize winner Jehane Noujaim unveils her wish: a global acceptance of diversity, mediated through the power of film. The first step? Getting people to understand each other. In 2003, Noujaim gained access to both sides of the story of the Iraq war for her film Control Room, a dichotomy she illustrates with provocative clips of Al Jazeera journalist Sameer Khader and U.S. press officer Josh Rushing. Noujaim ends by outlining her plans for Pangea Day, an event in which people all over the world can watch the same films at the same time. (Contains strong language.)

Continue reading Jehane Noujaim: TED Prize wish: Unite the world on Pangea Day, a global day of film

Thomas Barnett: The Pentagon’s new map for war and peace

In this bracingly honest and funny talk, international security strategist Thomas P.M. Barnett outlines a post-Cold War solution for the foundering US military: Break it in two. He suggests the military re-form into two groups: a Leviathan force, a small group of young and fierce soldiers capable of swift and immediate victories; and an internationally supported network of System Administrators, an older, wiser, more diverse organization that actually has the diplomacy and power it takes to build and maintain peace. Continue reading Thomas Barnett: The Pentagon’s new map for war and peace

Baby Orangutan

There is a new baby orangutan born at the Como Zoo in Saint Paul, Minnesota. I mention this for the edification of my local readers (who probably already know about it) and not as a statement of support or opposition to zoos, orangutans, or babies.Details, including photographs, here on Science Buzz.

Science Fair Season Starts

It is science fair season! Elmer’s Inc is cranking out the three-part display boards, Office Max is stocking up on its colored paper and glue sticks, and thousands upon thousands of kids are working out the fine details of the hypothesis they want to test using an experiment that can be demonstrated in the Science Fair.

Pretty boring, actually.

Unless you focus on the Christian Creationist Science Fairs. They are Always so much fun. And remember, Greg Laden’s Blog here at scienceblogs.com is your Christian Creation Science Creationist Science Fair Center! Keep checking back!

For now, I have a few examples of previous winners at the Trinity High School science fair, one of the classic fairs, the one everybody watches.
Continue reading Science Fair Season Starts

Bill Foster’s Letter

By now you all know about Bill Foster, an outgoing council member in St. Petersburg, Florida, who has very strong creationist leanings. Foster had written a widely cited letter linking Hitler and the Columbine shooters to Darwinism. I thought it would be fair to have the ENTIRE letter written by foster available, rather than allowing this quote mining to go unanswered! Continue reading Bill Foster’s Letter