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	Comments on: Mendeley:  A Reference Manager and More	</title>
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	<link>https://gregladen.com/blog/2010/04/13/mendeley-a-reference-manager-a/</link>
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		<title>
		By: Greg Laden		</title>
		<link>https://gregladen.com/blog/2010/04/13/mendeley-a-reference-manager-a/#comment-517086</link>

		<dc:creator><![CDATA[Greg Laden]]></dc:creator>
		<pubDate>Fri, 16 Apr 2010 16:59:59 +0000</pubDate>
		<guid isPermaLink="false">http://scienceblogs.com/gregladen/2010/04/13/mendeley-a-reference-manager-a/#comment-517086</guid>

					<description><![CDATA[I would like to add, as advice for young academics who are worried about the formats of your bibliographies and are willing to go through great lengths to make sure that the ref list for your paper can be generated by pressing a single button:  Get a job!  

Sure, it&#039;s a pain, but fixing up the Bib is not the point. The point is finding what you need when you need it.  Focus more on organizing your material with respect to content and use, and less on formatting the bib on the paper you finally produce.  If your software does it automatically, nice. If not, just do it yourself.  Stop whinging about it. 

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			<content:encoded><![CDATA[<p>I would like to add, as advice for young academics who are worried about the formats of your bibliographies and are willing to go through great lengths to make sure that the ref list for your paper can be generated by pressing a single button:  Get a job!  </p>
<p>Sure, it&#8217;s a pain, but fixing up the Bib is not the point. The point is finding what you need when you need it.  Focus more on organizing your material with respect to content and use, and less on formatting the bib on the paper you finally produce.  If your software does it automatically, nice. If not, just do it yourself.  Stop whinging about it. </p>
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		<title>
		By: Mr. Gunn		</title>
		<link>https://gregladen.com/blog/2010/04/13/mendeley-a-reference-manager-a/#comment-517085</link>

		<dc:creator><![CDATA[Mr. Gunn]]></dc:creator>
		<pubDate>Fri, 16 Apr 2010 16:04:10 +0000</pubDate>
		<guid isPermaLink="false">http://scienceblogs.com/gregladen/2010/04/13/mendeley-a-reference-manager-a/#comment-517085</guid>

					<description><![CDATA[Simon, thanks for that. It&#039;s great news for Zotero and a good step forward for their product.  With the number of new startups companies entering the research management space, I have great hopes for real innovation.

Let&#039;s remember that citation style managers are essentially a hack to support all the unnecessarily different formats required by different publishers.  They&#039;re essentially a idiom of print that has been shoveled into the digital world but when documents are rendered from a underlying database as opposed to printed using ink on paper, they can do the formatting at the time of rendering, not the time of writing. Offloading this effort would the allow academics to focus on the actual writing, not the fussy little details of what format things should be in.

The other exciting thing about all the activity in this space is that it sharpens the focus on open access.  All these tools work better for their users when there&#039;s more OA content available.]]></description>
			<content:encoded><![CDATA[<p>Simon, thanks for that. It&#8217;s great news for Zotero and a good step forward for their product.  With the number of new startups companies entering the research management space, I have great hopes for real innovation.</p>
<p>Let&#8217;s remember that citation style managers are essentially a hack to support all the unnecessarily different formats required by different publishers.  They&#8217;re essentially a idiom of print that has been shoveled into the digital world but when documents are rendered from a underlying database as opposed to printed using ink on paper, they can do the formatting at the time of rendering, not the time of writing. Offloading this effort would the allow academics to focus on the actual writing, not the fussy little details of what format things should be in.</p>
<p>The other exciting thing about all the activity in this space is that it sharpens the focus on open access.  All these tools work better for their users when there&#8217;s more OA content available.</p>
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		<title>
		By: Simon Cockell		</title>
		<link>https://gregladen.com/blog/2010/04/13/mendeley-a-reference-manager-a/#comment-517084</link>

		<dc:creator><![CDATA[Simon Cockell]]></dc:creator>
		<pubDate>Fri, 16 Apr 2010 04:16:47 +0000</pubDate>
		<guid isPermaLink="false">http://scienceblogs.com/gregladen/2010/04/13/mendeley-a-reference-manager-a/#comment-517084</guid>

					<description><![CDATA[I didn&#039;t mean the initial comment to sound quite so snippy. Apologies for that. I was attempting to make the point that Victor has clarified - that what is currently free will remain free, but that Mendeley will be moving to a so-called &#039;freemium&#039; model. I agree that this is a very good idea for a business model, providing an income to keep a good product going, without raising the barrier to entry.

I also get the resistance to using browser plugins for such a crucial piece of software. Others may be interested to know that Zotero has just announced (like, yesterday) that they are developing a stand-alone version of their product (&lt;a href=&quot;http://www.zotero.org/blog/standalone-zotero/&quot; rel=&quot;nofollow&quot;&gt;http://www.zotero.org/blog/standalone-zotero/&lt;/a&gt;).]]></description>
			<content:encoded><![CDATA[<p>I didn&#8217;t mean the initial comment to sound quite so snippy. Apologies for that. I was attempting to make the point that Victor has clarified &#8211; that what is currently free will remain free, but that Mendeley will be moving to a so-called &#8216;freemium&#8217; model. I agree that this is a very good idea for a business model, providing an income to keep a good product going, without raising the barrier to entry.</p>
<p>I also get the resistance to using browser plugins for such a crucial piece of software. Others may be interested to know that Zotero has just announced (like, yesterday) that they are developing a stand-alone version of their product (<a href="http://www.zotero.org/blog/standalone-zotero/" rel="nofollow">http://www.zotero.org/blog/standalone-zotero/</a>).</p>
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		<title>
		By: dnazone		</title>
		<link>https://gregladen.com/blog/2010/04/13/mendeley-a-reference-manager-a/#comment-517083</link>

		<dc:creator><![CDATA[dnazone]]></dc:creator>
		<pubDate>Thu, 15 Apr 2010 15:40:39 +0000</pubDate>
		<guid isPermaLink="false">http://scienceblogs.com/gregladen/2010/04/13/mendeley-a-reference-manager-a/#comment-517083</guid>

					<description><![CDATA[Will always remain free, eh? Just like &lt;a href=&quot;http://is.gd/bunPL&quot; rel=&quot;nofollow&quot;&gt;Ning&lt;/a&gt;?]]></description>
			<content:encoded><![CDATA[<p>Will always remain free, eh? Just like <a href="http://is.gd/bunPL" rel="nofollow">Ning</a>?</p>
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		<title>
		By: Greg Laden		</title>
		<link>https://gregladen.com/blog/2010/04/13/mendeley-a-reference-manager-a/#comment-517082</link>

		<dc:creator><![CDATA[Greg Laden]]></dc:creator>
		<pubDate>Thu, 15 Apr 2010 15:10:06 +0000</pubDate>
		<guid isPermaLink="false">http://scienceblogs.com/gregladen/2010/04/13/mendeley-a-reference-manager-a/#comment-517082</guid>

					<description><![CDATA[Victor, thanks for the clarification.

Personally, I think charging for expanded space is an excellent business model (assuming you are not more expensive than existing cloud services).  Collaborative tools .. that depends. Facebook is free (but uses ads).  Whatever you do, somebody will figure out a way of doing it for free, most likely on facebook.  You might as well go for an ad-based collaboration environment!

(in my humble uninformed opinion)]]></description>
			<content:encoded><![CDATA[<p>Victor, thanks for the clarification.</p>
<p>Personally, I think charging for expanded space is an excellent business model (assuming you are not more expensive than existing cloud services).  Collaborative tools .. that depends. Facebook is free (but uses ads).  Whatever you do, somebody will figure out a way of doing it for free, most likely on facebook.  You might as well go for an ad-based collaboration environment!</p>
<p>(in my humble uninformed opinion)</p>
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		<title>
		By: Victor		</title>
		<link>https://gregladen.com/blog/2010/04/13/mendeley-a-reference-manager-a/#comment-517081</link>

		<dc:creator><![CDATA[Victor]]></dc:creator>
		<pubDate>Thu, 15 Apr 2010 13:25:48 +0000</pubDate>
		<guid isPermaLink="false">http://scienceblogs.com/gregladen/2010/04/13/mendeley-a-reference-manager-a/#comment-517081</guid>

					<description><![CDATA[Hi Greg and Karen, 

it&#039;s Victor, one of the founders of Mendeley. Simon&#039;s point is partially correct in that not everything that Mendeley offers in the future will be a free of charge (likewise, Zotero also charges for additional storage space). At some point in the near future, we&#039;ll start offering additional features/services that users can purchase for a monthly fee, e.g. expanded storage space or advanced collaboration features. However, any features of Mendeley that are free will always remain free. 

Karen: Indeed, our Word/OpenOffice Plugins contain code licensed by Zotero under the ECL. Our plugins are likewise open source under the ECL. Besides, we are developing an open-source WYSIWYG Citation Style Editor which will most likely be hosted at &lt;a href=&quot;http://www.citationstyles.org&quot; rel=&quot;nofollow&quot;&gt;http://www.citationstyles.org&lt;/a&gt;. It&#039;s still very much work in progress, but you can access the code here: &lt;a 0=&quot;href:&quot;http://bitbucket.org/csledit/csl-wysiwyg-editor/&quot;&quot; rel=&quot;nofollow&quot;&gt;http://bitbucket.org/csledit/csl-wysiwyg-editor/&lt;/a&gt; or play around with the status quo here: &lt;a href=&quot;http://csleditor.quist.de/csleditor/show/1/example-citation-style&quot; rel=&quot;nofollow&quot;&gt;http://csleditor.quist.de/csleditor/show/1/example-citation-style&lt;/a&gt; (the UI will be overhauled completely before it&#039;s finished). 

All the best,
Victor]]></description>
			<content:encoded><![CDATA[<p>Hi Greg and Karen, </p>
<p>it&#8217;s Victor, one of the founders of Mendeley. Simon&#8217;s point is partially correct in that not everything that Mendeley offers in the future will be a free of charge (likewise, Zotero also charges for additional storage space). At some point in the near future, we&#8217;ll start offering additional features/services that users can purchase for a monthly fee, e.g. expanded storage space or advanced collaboration features. However, any features of Mendeley that are free will always remain free. </p>
<p>Karen: Indeed, our Word/OpenOffice Plugins contain code licensed by Zotero under the ECL. Our plugins are likewise open source under the ECL. Besides, we are developing an open-source WYSIWYG Citation Style Editor which will most likely be hosted at <a href="http://www.citationstyles.org" rel="nofollow">http://www.citationstyles.org</a>. It&#8217;s still very much work in progress, but you can access the code here: <a 0="href:"http://bitbucket.org/csledit/csl-wysiwyg-editor/"" rel="nofollow">http://bitbucket.org/csledit/csl-wysiwyg-editor/</a> or play around with the status quo here: <a href="http://csleditor.quist.de/csleditor/show/1/example-citation-style" rel="nofollow">http://csleditor.quist.de/csleditor/show/1/example-citation-style</a> (the UI will be overhauled completely before it&#8217;s finished). </p>
<p>All the best,<br />
Victor</p>
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		<title>
		By: Greg Laden		</title>
		<link>https://gregladen.com/blog/2010/04/13/mendeley-a-reference-manager-a/#comment-517080</link>

		<dc:creator><![CDATA[Greg Laden]]></dc:creator>
		<pubDate>Thu, 15 Apr 2010 11:19:48 +0000</pubDate>
		<guid isPermaLink="false">http://scienceblogs.com/gregladen/2010/04/13/mendeley-a-reference-manager-a/#comment-517080</guid>

					<description><![CDATA[Karen: Firefox is a web browser.  We were discussing a plugin.  Firefox needs to exist for the plugin to work, and the plugin has to be maintained to work with whatever Firefox does that requires changes in plugins.  That is not even close to what one would base a long term data management solution on, unless it worked entirely with a common file format that other software would be available to use, like bibtex.  (Which it might, I have not looked at that.)]]></description>
			<content:encoded><![CDATA[<p>Karen: Firefox is a web browser.  We were discussing a plugin.  Firefox needs to exist for the plugin to work, and the plugin has to be maintained to work with whatever Firefox does that requires changes in plugins.  That is not even close to what one would base a long term data management solution on, unless it worked entirely with a common file format that other software would be available to use, like bibtex.  (Which it might, I have not looked at that.)</p>
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		<title>
		By: Karen		</title>
		<link>https://gregladen.com/blog/2010/04/13/mendeley-a-reference-manager-a/#comment-517079</link>

		<dc:creator><![CDATA[Karen]]></dc:creator>
		<pubDate>Thu, 15 Apr 2010 07:39:47 +0000</pubDate>
		<guid isPermaLink="false">http://scienceblogs.com/gregladen/2010/04/13/mendeley-a-reference-manager-a/#comment-517079</guid>

					<description><![CDATA[&quot;Some proprietary components&quot;? &quot;Not completely open source&quot;? Are you kidding me? Mendelay is 99% proprietary. Other than a few Qt libraries that were already open source (and thus had to be kept open), Marndely&#039;s only open code is the citation formatting engine they copied from Zotero, again, also already open code.

I like the author&#039;s logic on not wanting to change research software frequently, but I don&#039;t know that I would bet Mandelay will last longer than Firefox, on part due to Firefox&#039;s large and vibrant open source community, and partly because it&#039;s not yet clear that Mandelay has a workable business model. How long can their funding hold out? ]]></description>
			<content:encoded><![CDATA[<p>&#8220;Some proprietary components&#8221;? &#8220;Not completely open source&#8221;? Are you kidding me? Mendelay is 99% proprietary. Other than a few Qt libraries that were already open source (and thus had to be kept open), Marndely&#8217;s only open code is the citation formatting engine they copied from Zotero, again, also already open code.</p>
<p>I like the author&#8217;s logic on not wanting to change research software frequently, but I don&#8217;t know that I would bet Mandelay will last longer than Firefox, on part due to Firefox&#8217;s large and vibrant open source community, and partly because it&#8217;s not yet clear that Mandelay has a workable business model. How long can their funding hold out? </p>
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		<title>
		By: Azkyroth		</title>
		<link>https://gregladen.com/blog/2010/04/13/mendeley-a-reference-manager-a/#comment-517078</link>

		<dc:creator><![CDATA[Azkyroth]]></dc:creator>
		<pubDate>Thu, 15 Apr 2010 00:18:55 +0000</pubDate>
		<guid isPermaLink="false">http://scienceblogs.com/gregladen/2010/04/13/mendeley-a-reference-manager-a/#comment-517078</guid>

					<description><![CDATA[I am not sure I understand this but won&#039;t be trying Zotero either, mainly because the only reason I even have Firefox is for a handful of college web access systems that have clumsily implemented some sort of proprietary database/bulletin-board software that must have been deliberately designed not to work with Opera, since there are numerous webpages with identical front-end functionality that work just fine in it.  Firefox annoys me because it lets me change far fewer of its options, including hotkey assignments, and because it seems like every change to newer versions of Opera that annoys me (possibly even including 10.5x&#039;s flat-out refusal to finish loading certain sites essentially at random) seems to be an imitation of some Firefox feature to make it &quot;friendlier&quot; for users switching.]]></description>
			<content:encoded><![CDATA[<p>I am not sure I understand this but won&#8217;t be trying Zotero either, mainly because the only reason I even have Firefox is for a handful of college web access systems that have clumsily implemented some sort of proprietary database/bulletin-board software that must have been deliberately designed not to work with Opera, since there are numerous webpages with identical front-end functionality that work just fine in it.  Firefox annoys me because it lets me change far fewer of its options, including hotkey assignments, and because it seems like every change to newer versions of Opera that annoys me (possibly even including 10.5x&#8217;s flat-out refusal to finish loading certain sites essentially at random) seems to be an imitation of some Firefox feature to make it &#8220;friendlier&#8221; for users switching.</p>
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		<title>
		By: Greg Laden		</title>
		<link>https://gregladen.com/blog/2010/04/13/mendeley-a-reference-manager-a/#comment-517077</link>

		<dc:creator><![CDATA[Greg Laden]]></dc:creator>
		<pubDate>Wed, 14 Apr 2010 17:15:59 +0000</pubDate>
		<guid isPermaLink="false">http://scienceblogs.com/gregladen/2010/04/13/mendeley-a-reference-manager-a/#comment-517077</guid>

					<description><![CDATA[Simon, I can&#039;t find anywhere in that user&#039;s agreement that says that  Mendeley will  start charging for their software at some point. Could you please provide a quote or something? I&#039;m probably just missing it, if  you say it&#039;s there, I&#039;m sure  it is.

Also, Zotero is a Firefox extention.  In the past I&#039;ve chosen my reference managing software very carefully.  I have 10,000 print papers and another 20,000 references I regularly search through.  I have changed my system from dBase to Access to Endnote to Chaos to Mendely over 30 years.  

In other words, the lifespan of my mission-critical reference management exceds that of the average popular browser, and certainly of the average browser plugin.  

Plus, I HATE browser  plugins. So  that&#039;s why I did not even try Zotero. Though it looks interesting. ]]></description>
			<content:encoded><![CDATA[<p>Simon, I can&#8217;t find anywhere in that user&#8217;s agreement that says that  Mendeley will  start charging for their software at some point. Could you please provide a quote or something? I&#8217;m probably just missing it, if  you say it&#8217;s there, I&#8217;m sure  it is.</p>
<p>Also, Zotero is a Firefox extention.  In the past I&#8217;ve chosen my reference managing software very carefully.  I have 10,000 print papers and another 20,000 references I regularly search through.  I have changed my system from dBase to Access to Endnote to Chaos to Mendely over 30 years.  </p>
<p>In other words, the lifespan of my mission-critical reference management exceds that of the average popular browser, and certainly of the average browser plugin.  </p>
<p>Plus, I HATE browser  plugins. So  that&#8217;s why I did not even try Zotero. Though it looks interesting. </p>
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